STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHL24_1AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). (304 aa)    
Predicted Functional Partners:
BHLH140_1
Transcription factor bhlh140.
      
 0.607
BHLH140_0
Transcription factor bhlh140.
      
 0.459
JUB1_1
Transcription factor jungbrunnen 1.
  
     0.447
MAP70.2_0
Microtubule-associated protein 70-2.
  
     0.443
MAP70.2_1
Microtubule-associated protein 70-2.
  
     0.442
MAP70.1
Microtubule-associated protein 70-1.
  
     0.442
A4A49_42785
Uncharacterized protein.
  
     0.436
NAC007_2
Nac domain-containing protein 7.
  
     0.427
XTH22_0
Xyloglucan endotransglucosylasehydrolase protein 22.
  
     0.424
JUB1_0
Transcription factor jungbrunnen 1.
  
     0.423
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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