Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFC2_8Serinethreonine-protein kinase afc2. (523 aa)    
Predicted Functional Partners:
PRP38
Pre-mrna-splicing factor 38.
    
 
 0.611
SC35
Zeatin Serine/arginine-rich-splicing factor SC35.
   
 
 0.605
RH45
Dead-box atp-dependent rna helicase 45.
   
   0.577
A4A49_06909
Putative receptor-like protein kinase.
    
 
 0.565
A4A49_02829
Putative receptor-like protein kinase.
    
 
 0.565
A4A49_05365
Putative receptor-like protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.565
A4A49_37563
Putative receptor-like protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.565
RS31_1
Serine/arginine-rich-splicing factor RS31.
    
 
 0.557
RS31_0
Serinearginine-rich splicing factor rs31.
    
 
 0.557
CDC5_0
Cell division cycle 5-like protein.
    
   0.555
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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