STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_05383Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
AXX15_1
Auxin-induced protein x15.
  
     0.520
OFP6_1
Transcription repressor ofp6.
  
     0.513
A4A49_19654
Uncharacterized protein.
  
     0.505
OFP6_0
Transcription repressor ofp6.
  
     0.504
A4A49_38538
Uncharacterized protein.
  
     0.502
AGL62_3
Agamous-like mads-box protein agl62.
  
     0.495
A4A49_18654
Heme-binding-like protein, chloroplastic.
      
 0.493
A4A49_13094
C-type lectin receptor-like tyrosine-protein kinase.
      
 0.493
A4A49_04207
Uncharacterized protein.
      
 0.493
A4A49_01743
Web family protein, chloroplastic.
      
 0.493
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.