STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRE_3Putative serinethreonine protein kinase ire. (246 aa)    
Predicted Functional Partners:
SCL28_0
Scarecrow-like protein 28; Belongs to the GRAS family.
      
 0.474
MBF1C
Multiprotein-bridging factor 1c.
      
 0.461
A4A49_07051
Putative inactive protein kinase.
   
    0.440
A4A49_62794
Putative inactive protein kinase.
   
    0.440
HT1_5
Serinethreonine-protein kinase ht1; Belongs to the protein kinase superfamily.
  
 
  0.425
HT1_9
Serinethreonine-protein kinase ht1; Belongs to the protein kinase superfamily.
  
 
  0.422
CDC2_0
Cell division control protein 2-like protein.
  
    0.416
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.