STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYS5_1Cysteine proteinase inhibitor 5. (131 aa)    
Predicted Functional Partners:
PVA42_2
Vesicle-associated protein 4-2.
  
     0.513
A4A49_08206
Uncharacterized protein.
  
     0.505
PP2B8
Putative f-box protein pp2-b8.
  
     0.502
A4A49_20337
Uncharacterized protein.
  
     0.498
A4A49_10956
Uncharacterized protein.
  
     0.494
CXE2_2
Putative carboxylesterase 2.
  
 
   0.486
HIDH_3
2-hydroxyisoflavanone dehydratase.
  
 
   0.486
A4A49_05509
Uncharacterized protein.
  
     0.485
A4A49_03662
Uncharacterized protein.
  
     0.476
A4A49_20304
Putative f-boxkelch-repeat protein.
  
     0.474
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.