STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP78A5_2Cytochrome p450 78a5; Belongs to the cytochrome P450 family. (521 aa)    
Predicted Functional Partners:
A4A49_15137
Alpha-ketoglutarate-dependent dioxygenase alkb.
      
 0.579
CYP96A15_1
Alkane hydroxylase mah1; Belongs to the cytochrome P450 family.
  
  
  0.450
MYB44_0
Transcription factor myb44.
      
 0.449
PCS1_4
Aspartic proteinase pcs1; Belongs to the peptidase A1 family.
      
 0.449
PCS1_2
Aspartic proteinase pcs1; Belongs to the peptidase A1 family.
      
 0.449
CYP96A15_9
Alkane hydroxylase mah1; Belongs to the cytochrome P450 family.
  
  
  0.441
A4A49_10843
Putative acyl-activating enzyme 19.
  
 0.432
H1_1
Histone h1.
     
 0.421
CYP72A63
11-oxo-beta-amyrin 30-oxidase.
  
  
  0.416
CYP96A15_0
Alkane hydroxylase mah1; Belongs to the cytochrome P450 family.
  
  
  0.407
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.