STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_36921Uncharacterized protein. (904 aa)    
Predicted Functional Partners:
TRP5_0
Telomere repeat-binding protein 5.
  
 
  0.533
BHLH130_1
Transcription factor bhlh130.
  
  0.533
BHLH130_4
Transcription factor bhlh130.
  
  0.531
A4A49_21360
Uncharacterized protein.
  
     0.518
A4A49_50687
Uncharacterized protein.
  
     0.514
LNG1_1
Protein longifolia 1.
  
     0.513
A4A49_13601
Uncharacterized protein.
  
     0.510
A4A49_20835
Uncharacterized protein.
  
 
  0.509
A4A49_07219
Uncharacterized protein.
  
     0.508
BHLH128
Transcription factor bhlh128.
  
     0.505
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.