STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INO80_0Dna helicase ino80. (222 aa)    
Predicted Functional Partners:
ARP9
Actin-related protein 9; Belongs to the actin family.
    
 0.940
ARP4
Actin-related protein 4; Belongs to the actin family.
    
 0.928
ARP5
Actin-related protein 5; Belongs to the actin family.
    
 0.924
RIN1_1
RuvB-like helicase; Belongs to the RuvB family.
   
 0.913
INO80_1
Dna helicase ino80.
 
  
  0.887
RIN1_2
RuvB-like helicase; Belongs to the RuvB family.
    
 0.741
RIN1_5
Ruvb-like protein 1.
    
 0.741
RIN1_3
Ruvb-like protein 1.
    
 0.741
RIN1_0
RuvB-like helicase.
    
 0.741
RIN1_4
Ruvb-like protein 1.
    
 0.741
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.