STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL6_2Casein kinase 1-like protein 6; Belongs to the protein kinase superfamily. (464 aa)    
Predicted Functional Partners:
A4A49_13360
Uncharacterized protein.
    
 0.780
A4A49_20228
Uncharacterized protein.
    
 0.728
A4A49_08062
Bms1-type G domain-containing protein.
    
 0.641
A4A49_38005
Uncharacterized protein.
    
 0.606
A4A49_25927
KH domain-containing protein.
    
 0.540
A4A49_40220
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
     
 0.496
HDA6_2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
      
 0.493
A4A49_10184
UBP-type domain-containing protein.
      
 0.493
A4A49_34326
Rio2_N domain-containing protein.
    
 0.488
A4A49_34328
Rio2_N domain-containing protein.
    
 0.488
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
Server load: low (20%) [HD]