STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIPK4Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (439 aa)    
Predicted Functional Partners:
DSP4
Phosphoglucan phosphatase dsp4, amyloplastic.
    
 0.554
LSF1
Phosphoglucan phosphatase lsf1, chloroplastic.
    
 0.554
A4A49_10000
Protein phosphatase 2c and cyclic nucleotide-bindingkinase domain-containing protein.
   
0.482
CBL1_0
Calcineurin b-like protein 1.
    
 0.474
CBL1_1
Calcineurin b-like protein 1.
    
 0.474
CTR1_0
Serinethreonine-protein kinase ctr1.
  
 
  0.445
CMTA5
Calmodulin-binding transcription activator 5.
      
 0.406
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.