STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPK11_0Calcium-dependent protein kinase 11; Belongs to the protein kinase superfamily. (447 aa)    
Predicted Functional Partners:
RBOHD
Respiratory burst oxidase-like protein d.
   
 
 0.663
RBOHC
Respiratory burst oxidase-like protein c.
   
 
 0.663
RBOHE_0
Respiratory burst oxidase-like protein e.
   
 
 0.658
RBOHE_2
Respiratory burst oxidase-like protein e.
   
 
 0.658
RBOHE_1
Respiratory burst oxidase-like protein e.
   
 
 0.658
RBOHA
Respiratory burst oxidase-like protein a.
   
 
 0.658
A4A49_41853
Uncharacterized protein.
   
 0.444
A4A49_10000
Protein phosphatase 2c and cyclic nucleotide-bindingkinase domain-containing protein.
   
0.408
SKD1_6
Protein suppressor of k(+) transport growth defect 1; Belongs to the AAA ATPase family.
   
 
 0.407
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.