STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIP1_6Putative e3 ubiquitin-protein ligase hip1. (542 aa)    
Predicted Functional Partners:
A4A49_35854
RRM domain-containing protein.
    
 
 0.581
A4A49_00012
Uncharacterized protein.
  
     0.493
A4A49_34382
Uncharacterized protein.
  
     0.485
A4A49_15737
Uncharacterized protein.
  
     0.473
MAKR6_0
Putative membrane-associated kinase regulator 6.
  
     0.470
A4A49_20581
F-box protein.
  
     0.468
A4A49_14947
Uncharacterized protein.
      
 0.459
A4A49_14945
Importin N-terminal domain-containing protein.
      
 0.459
A4A49_14946
Uncharacterized protein.
      
 0.459
A4A49_00771
Uncharacterized protein.
  
     0.450
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.