Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HERK1_0Receptor-like protein kinase herk 1. (815 aa)    
Predicted Functional Partners:
RALFL34
Protein ralf-like 34.
      
 0.579
CAP1_0
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 0.514
CAP1_1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 0.514
GSTU7
Glutathione s-transferase u7; Belongs to the GST superfamily.
      
 0.492
HY5
Transcription factor hy5.
    
 0.483
IPK1
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
      
 0.462
PPCK2_0
Phosphoenolpyruvate carboxylase kinase 2; Belongs to the protein kinase superfamily.
  
  0.426
STI
Protein stichel.
      
 0.423
VSR3
Vacuolar-sorting receptor 3.
     
 0.408
A4A49_07097
PA domain-containing protein.
     
 0.408
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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