STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBK1Serine/threonine-protein kinase CBK1; Protein kinase that seems to play a role in the regulation of cell morphogenesis and proliferation. (588 aa)    
Predicted Functional Partners:
YALI0_D24035g
YALI0D24035p.
    
 
 0.939
UTP25
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
      
 0.917
YALI0_E16038g
YALI0E16038p.
   
 
 0.915
YALI0_F13717g
YALI0F13717p.
   
 
 0.902
YALI0_A17336g
YALI0A17336p.
   
 0.861
YALI0_E16973g
YALI0E16973p.
   
 
 0.857
YALI0_D08580g
YALI0D08580p.
   
 0.857
SEC9
Protein transport protein SEC9; Belongs to the SNAP-25 family.
      
 0.827
DBP6
ATP-dependent RNA helicase DBP6; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs.
     
 0.821
YALI0_D01199g
YALI0D01199p.
   
 
 0.677
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
Server load: low (14%) [HD]