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ROK1 protein (Yarrowia lipolytica) - STRING interaction network
"ROK1" - YALI0B21538p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROK1YALI0B21538p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (547 aa)    
Predicted Functional Partners:
XP_500322.1
YALI0A21197p (694 aa)
     
 
  0.994
XP_505171.1
YALI0F08657p (687 aa)
     
  0.993
XP_500703.1
YALI0B10065p; Involved in nucleolar processing of pre-18S ribosomal RNA (641 aa)
     
  0.992
XP_505410.1
YALI0F14377p (468 aa)
     
  0.991
XP_501306.1
YALI0C00913p (912 aa)
     
    0.990
XP_500372.1
YALI0B01078p (906 aa)
     
  0.982
NOP14
YALI0F08371p; Involved in nucleolar processing of pre-18S ribosomal RNA. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm (By similarity) (832 aa)
     
 
  0.980
XP_506048.1
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (359 aa)
     
  0.980
XP_505533.1
YALI0F17380p (183 aa)
     
  0.980
XP_502109.1
YALI0C21846p (1117 aa)
     
  0.975
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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