STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC11Signal peptidase complex catalytic subunit SEC11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). (172 aa)    
Predicted Functional Partners:
YALI0_A19492g
YALI0A19492p.
   
 0.994
YALI0_F26156g
YALI0F26156p.
   
 0.992
SPC3
Microsomal signal peptidase subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.
   
 0.992
YALI0_C13970g
YALI0C13970p.
   
 
  0.964
YALI0_A20174g
YALI0A20174p.
   
 
  0.964
YALI0_B02838g
YALI0B02838p; Belongs to the peptidase S9B family.
   
 
 0.716
YALI0_E34045g
YALI0E34045p.
   
 
 0.623
YALI0_A17281g
YALI0A17281p.
   
 
 0.620
IML1
Vacuolar membrane-associated protein IML1.
    
 0.610
YALI0_B17842g
YALI0B17842p.
    
 0.578
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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