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TRM5 protein (Yarrowia lipolytica) - STRING interaction network
"TRM5" - YALI0D05489p in Yarrowia lipolytica
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query proteins and first shell of interactors
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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TRM5YALI0D05489p; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (508 aa)    
Predicted Functional Partners:
XP_503279.1
YALI0D25564p (245 aa)
 
 
   
  0.553
XP_504367.1
YALI0E24761p (130 aa)
     
 
  0.543
XP_502554.1
YALI0D07920p (376 aa)
 
 
   
  0.539
XP_504653.1
YALI0E31779p (689 aa)
     
   
  0.535
TRM61
YALI0F22737p; Catalytic subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA (389 aa)
     
   
  0.514
TRM7
YALI0F16049p; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (312 aa)
     
   
  0.513
XP_504602.1
YALI0E30723p (492 aa)
     
   
  0.513
XP_503641.1
YALI0E06765p (752 aa)
     
   
  0.509
TRM10
YALI0F12771p; S-adenosyl-L-methionine-dependent guanine N(1)- methyltransferase that catalyzes the formation of N(1)- methylguanine at position 9 (m1G9) in cytoplasmic tRNA (371 aa)
     
   
  0.477
XP_502288.1
YALI0D01485p; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3’-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha- carboxypropyl (acp) group from S-adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86 (401 aa)
     
   
  0.470
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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