STRINGSTRING
SEC22 protein (Yarrowia lipolytica) - STRING interaction network
"SEC22" - YALI0D21956p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22YALI0D21956p; Required for transport from the ER to the Golgi complex (213 aa)    
Predicted Functional Partners:
BOS1
YALI0F31669p; SNARE required for protein transport between the ER and the Golgi complex (226 aa)
     
  0.996
XP_501920.1
YALI0C16819p (306 aa)
     
  0.995
XP_505860.1
YALI0F25223p (159 aa)
     
  0.993
XP_501696.1
YALI0C10846p (339 aa)
       
  0.992
XP_503071.2
YALI0D20416p (590 aa)
     
  0.974
XP_502203.1
YALI0C23947p (292 aa)
     
  0.972
XP_504903.1
YALI0F02387p (1906 aa)
     
  0.971
XP_501468.1
YALI0C05302p (321 aa)
       
  0.970
YKT6
YALI0E21329p (200 aa)
     
0.969
XP_503187.1
YALI0D23353p; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (219 aa)
     
  0.963
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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