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SRP54 protein (Yarrowia lipolytica) - STRING interaction network
"SRP54" - YALI0F03839p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP54YALI0F03839p; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) (536 aa)    
Predicted Functional Partners:
XP_501994.1
YALI0C18997p; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (561 aa)
     
  0.978
XP_505871.1
60S ribosomal protein L25 (141 aa)
     
  0.970
SEC65
YALI0F21505p; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. It must be involved intimately in the translocation of a wide variety of protein substrates (By similarity) (310 aa)
     
  0.967
XP_505785.1
YALI0F23375p (557 aa)
   
0.967
XP_501632.1
60S ribosomal protein L16 (200 aa)
   
  0.961
XP_505841.1
60S ribosomal protein L2 (254 aa)
       
  0.960
XP_501165.1
60S ribosomal protein L28 (149 aa)
   
  0.956
XP_504264.1
60S ribosomal protein L5 (296 aa)
   
  0.955
XP_499925.1
60S ribosomal protein L35 (123 aa)
     
    0.951
XP_502643.2
Mitochondrial 54S ribosomal protein YmL23 (154 aa)
   
  0.949
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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