STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC15Pre-mRNA-splicing factor CWC15; Involved in pre-mRNA splicing. (215 aa)    
Predicted Functional Partners:
PRP46
Pre-mRNA-splicing factor PRP46; Involved in pre-mRNA splicing and required for cell cycle progression at G2/M.
   
 0.999
CEF1
Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control.
   
 0.999
YALI0_C03982g
YALI0C03982p.
   
 0.999
YALI0_C16005g
YALI0C16005p.
   
 0.997
YALI0_B18238g
YALI0B18238p.
   
 
 0.995
PRP45
Pre-mRNA-processing protein 45; Involved in pre-mRNA splicing.
   
 
 0.994
YALI0_B03014g
YALI0B03014p.
   
 0.994
YALI0_A20768g
YALI0A20768p.
    
 
 0.993
YALI0_D27346g
YALI0D27346p.
   
 0.992
YALI0_C10648g
YALI0C10648p.
    
 0.992
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.