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PRP28 protein (Yarrowia lipolytica) - STRING interaction network
"PRP28" - YALI0F28391p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
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PRP28YALI0F28391p; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5’-splice site duplex to permit an effective competition for the 5’-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5’-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity) (575 aa)    
Predicted Functional Partners:
XP_501687.2
YALI0C10648p (2357 aa)
     
  0.975
XP_505089.1
YALI0F06644p (115 aa)
       
  0.968
XP_500743.1
YALI0B11022p (94 aa)
       
  0.952
CLF1
YALI0F18392p; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity) (676 aa)
     
  0.932
XP_504496.1
YALI0E28226p (452 aa)
     
  0.919
XP_505676.1
YALI0F20724p (2106 aa)
     
  0.886
XP_500859.1
YALI0B13904p (1896 aa)
     
  0.885
XP_502814.1
YALI0D14102p (164 aa)
     
  0.875
XP_503283.1
YALI0D25652p (207 aa)
       
  0.872
SYF1
YALI0D00561p; Involved in pre-mRNA splicing and cell cycle progression (736 aa)
     
  0.871
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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