STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOS1Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex; Belongs to the BOS1 family. (226 aa)    
Predicted Functional Partners:
YALI0_F25223g
YALI0F25223p.
   
 0.999
YALI0_D23353g
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.999
SEC22
Protein transport protein SEC22; Required for transport from the ER to the Golgi complex. Belongs to the synaptobrevin family.
    
 0.999
YALI0_C16819g
YALI0C16819p.
   
 0.999
YKT6
Synaptobrevin homolog YKT6.
   
 0.998
YALI0_D20416g
YALI0D20416p; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.998
YALI0_F02387g
YALI0F02387p.
    
 0.994
YALI0_E05269g
YALI0E05269p.
   
 0.967
YALI0_C23947g
YALI0C23947p.
    
 0.957
YALI0_E11825g
YALI0E11825p.
    
 0.887
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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