STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZX12599.1Ferredoxin. (478 aa)    
Predicted Functional Partners:
KZX11921.1
Molybdopterin dinucleotide binding domain protein.
  
 0.953
ndhI_2
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
  
  0.948
fhcA
Formyltransferase/hydrolase complex Fhc subunit A.
  
 0.892
fhcC
Formyltransferase/hydrolase complex Fhc subunit C.
  
 0.888
fdnG
Formate dehydrogenase, nitrate-inducible, major subunit precursor.
 
  0.885
KZX12598.1
Ferredoxin.
 
    
0.842
ndhI_3
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
 
  0.826
ndhI_4
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
  
 
 0.772
KZX11503.1
Coenzyme F420-reducing hydrogenase subunit beta.
    
 0.769
fdhF
Formate dehydrogenase H.
   
  0.768
Your Current Organism:
Methanobrevibacter curvatus
NCBI taxonomy Id: 49547
Other names: DSM 11111, M. curvatus, strain RFM-2
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