STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kynBKynurenine formamidase. (234 aa)    
Predicted Functional Partners:
csd
Putative cysteine desulfurase.
  
 
  0.476
serA
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.474
accC
Biotin carboxylase.
    
  0.465
ttdA_1
L(+)-tartrate dehydratase subunit alpha.
    
  0.465
ttdA_2
L(+)-tartrate dehydratase subunit alpha.
    
  0.465
mlhB
Monoterpene epsilon-lactone hydrolase.
    
  0.455
fdhF
Formate dehydrogenase H.
    
  0.455
glnS
glutamine--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
    
  0.452
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
     
 0.435
nuoI_1
NADH-quinone oxidoreductase subunit I.
    
  0.432
Your Current Organism:
Methanobrevibacter curvatus
NCBI taxonomy Id: 49547
Other names: DSM 11111, M. curvatus, strain RFM-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.