Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZX11498.1 | argB | MBCUR_14070 | MBCUR_07360 | Hypothetical protein. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.461 |
KZX11498.1 | hsdR | MBCUR_14070 | MBCUR_16080 | Hypothetical protein. | Type-1 restriction enzyme R protein. | 0.447 |
KZX11498.1 | recQ_2 | MBCUR_14070 | MBCUR_11330 | Hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.510 |
KZX11498.1 | trpB_1 | MBCUR_14070 | MBCUR_06020 | Hypothetical protein. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.408 |
argB | KZX11498.1 | MBCUR_07360 | MBCUR_14070 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Hypothetical protein. | 0.461 |
hsdR | KZX11498.1 | MBCUR_16080 | MBCUR_14070 | Type-1 restriction enzyme R protein. | Hypothetical protein. | 0.447 |
recQ_2 | KZX11498.1 | MBCUR_11330 | MBCUR_14070 | ATP-dependent DNA helicase RecQ. | Hypothetical protein. | 0.510 |
trpB_1 | KZX11498.1 | MBCUR_06020 | MBCUR_14070 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Hypothetical protein. | 0.408 |