Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX10814.1Hypothetical protein. (283 aa)    
Predicted Functional Partners:
KZX12745.1
Hypothetical protein.
  
     0.628
KZX14534.1
Archaeal ATPase.
  
     0.529
KZX13086.1
Archaeal ATPase.
  
     0.509
KZX10813.1
Hypothetical protein.
       0.462
KZX12268.1
CRISPR-associated protein.
  
     0.451
vapC_5
tRNA(fMet)-specific endonuclease VapC.
  
     0.406
yjcD
Putative ATP-dependent DNA helicase YjcD.
  
     0.405
Your Current Organism:
Methanobrevibacter curvatus
NCBI taxonomy Id: 49547
Other names: DSM 11111, M. curvatus, strain RFM-2
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