Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LAFE_0A00980G | LAFE_0C00364G | A0A1G4M6A7 | A0A1G4M8T7 | LAFE_0A00980g1_1. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.931 |
LAFE_0A00980G | LAFE_0D07492G | A0A1G4M6A7 | A0A1G4MBR0 | LAFE_0A00980g1_1. | LAFE_0D07492g1_1. | 0.982 |
LAFE_0A00980G | LAFE_0E13982G | A0A1G4M6A7 | A0A1G4MEA0 | LAFE_0A00980g1_1. | RNA helicase. | 0.916 |
LAFE_0A00980G | LAFE_0G09032G | A0A1G4M6A7 | A0A1G4MHZ3 | LAFE_0A00980g1_1. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.963 |
LAFE_0A00980G | LAFE_0G11320G | A0A1G4M6A7 | A0A1G4MI37 | LAFE_0A00980g1_1. | LAFE_0G11320g1_1. | 0.939 |
LAFE_0A00980G | LAFE_0G14774G | A0A1G4M6A7 | A0A1G4MIG9 | LAFE_0A00980g1_1. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.931 |
LAFE_0A00980G | LAFE_0H01222G | A0A1G4M6A7 | A0A1G4MJ19 | LAFE_0A00980g1_1. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.924 |
LAFE_0A00980G | LAFE_0H03642G | A0A1G4M6A7 | A0A1G4MJD7 | LAFE_0A00980g1_1. | LAFE_0H03642g1_1. | 0.988 |
LAFE_0A00980G | LAFE_0H09780G | A0A1G4M6A7 | A0A1G4MK56 | LAFE_0A00980g1_1. | LAFE_0H09780g1_1. | 0.954 |
LAFE_0A00980G | NOP7 | A0A1G4M6A7 | A0A1G4MB95 | LAFE_0A00980g1_1. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.943 |
LAFE_0C00364G | LAFE_0A00980G | A0A1G4M8T7 | A0A1G4M6A7 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | LAFE_0A00980g1_1. | 0.931 |
LAFE_0C00364G | LAFE_0D07492G | A0A1G4M8T7 | A0A1G4MBR0 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | LAFE_0D07492g1_1. | 0.942 |
LAFE_0C00364G | LAFE_0E13982G | A0A1G4M8T7 | A0A1G4MEA0 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | RNA helicase. | 0.956 |
LAFE_0C00364G | LAFE_0G09032G | A0A1G4M8T7 | A0A1G4MHZ3 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.994 |
LAFE_0C00364G | LAFE_0G11320G | A0A1G4M8T7 | A0A1G4MI37 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | LAFE_0G11320g1_1. | 0.992 |
LAFE_0C00364G | LAFE_0G14774G | A0A1G4M8T7 | A0A1G4MIG9 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
LAFE_0C00364G | LAFE_0H01222G | A0A1G4M8T7 | A0A1G4MJ19 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.969 |
LAFE_0C00364G | LAFE_0H03642G | A0A1G4M8T7 | A0A1G4MJD7 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | LAFE_0H03642g1_1. | 0.963 |
LAFE_0C00364G | LAFE_0H09780G | A0A1G4M8T7 | A0A1G4MK56 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | LAFE_0H09780g1_1. | 0.977 |
LAFE_0C00364G | NOP7 | A0A1G4M8T7 | A0A1G4MB95 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.982 |
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