STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0A01838GLAFE_0A01838g1_1; Belongs to the GST superfamily. (215 aa)    
Predicted Functional Partners:
LAFE_0D02630G
LAFE_0D02630g1_1; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.999
LAFE_0D09384G
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.999
LAFE_0F09494G
LAFE_0F09494g1_1.
   
 
 0.996
LAFE_0C03774G
LAFE_0C03774g1_1.
   
 
 0.995
LAFE_0F04104G
LAFE_0F04104g1_1.
   
 
 0.978
LAFE_0C06722G
LAFE_0C06722g1_1; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.976
LAFE_0C12904G
LAFE_0C12904g1_1.
  
0.971
LAFE_0G12992G
LAFE_0G12992g1_1.
  
0.971
LAFE_0A01596G
LAFE_0A01596g1_1.
   
 
 0.966
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.963
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.