STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0A02740GLAFE_0A02740g1_1. (413 aa)    
Predicted Functional Partners:
LAFE_0E03934G
LAFE_0E03934g1_1.
    
 0.997
LAFE_0H17458G
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.994
LAFE_0D04258G
LAFE_0D04258g1_1.
   
 
 0.984
LAFE_0C01486G
LAFE_0C01486g1_1.
   
 
 0.966
LAFE_0H10506G
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
    
   0.954
LAFE_0B03004G
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.945
LAFE_0D06986G
Mannan endo-1,6-alpha-mannosidase.
    
 0.884
LAFE_0H15346G
Mannan endo-1,6-alpha-mannosidase.
    
 0.884
LAFE_0H09054G
Non-specific serine/threonine protein kinase.
    
   0.753
LAFE_0A05402G
LAFE_0A05402g1_1.
   
 
 0.631
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.