STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0A01596GLAFE_0A01596g1_1. (177 aa)    
Predicted Functional Partners:
LAFE_0A00584G
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
LAFE_0A03422G
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
LAFE_0A04786G
40S ribosomal protein S27.
   
 
 0.999
LAFE_0B00694G
LAFE_0B00694g1_1.
  
 0.999
LAFE_0B01156G
LAFE_0B01156g1_1.
   
 0.999
LAFE_0B01420G
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
LAFE_0B03532G
LAFE_0B03532g1_1.
 
 0.999
LAFE_0B05160G
LAFE_0B05160g1_1.
  
 0.999
LAFE_0B04522G
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.999
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.