STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0A07778GLAFE_0A07778g1_1. (872 aa)    
Predicted Functional Partners:
LAFE_0F00980G
LAFE_0F00980g1_1.
    
 
 0.979
LAFE_0F05402G
LAFE_0F05402g1_1.
   
 
 0.969
LAFE_0B01068G
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.968
LAFE_0G03796G
LAFE_0G03796g1_1.
    
   0.954
LAFE_0G06700G
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.897
LAFE_0E03246G
LAFE_0E03246g1_1.
   
 
 0.870
LAFE_0H10308G
LAFE_0H10308g1_1.
   
 0.829
LAFE_0E07492G
LAFE_0E07492g1_1.
    
 
 0.819
LAFE_0A05248G
LAFE_0A05248g1_1.
   
 0.816
LAFE_0D05820G
LAFE_0D05820g1_1; Belongs to the cyclin family.
   
 0.811
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.