STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0B01222GLAFE_0B01222g1_1. (1538 aa)    
Predicted Functional Partners:
LAFE_0A00540G
Non-specific serine/threonine protein kinase.
  
 
0.988
LAFE_0F06876G
LAFE_0F06876g1_1.
    
 0.940
LAFE_0C11870G
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.853
LAFE_0D04324G
LAFE_0D04324g1_1.
    
 0.825
LAFE_0F06700G
LAFE_0F06700g1_1.
    
 0.816
LAFE_0G12464G
mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway.
    
 0.810
LAFE_0G04588G
LAFE_0G04588g1_1; Belongs to the protein kinase superfamily.
   
0.809
LAFE_0C04610G
LAFE_0C04610g1_1; Belongs to the protein kinase superfamily.
   
0.782
LAFE_0H05820G
LAFE_0H05820g1_1.
    
 0.737
LAFE_0H10088G
LAFE_0H10088g1_1.
    
 0.688
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.