STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0B01662GLAFE_0B01662g1_1. (649 aa)    
Predicted Functional Partners:
LAFE_0F11782G
LAFE_0F11782g1_1.
   
 
 0.760
LAFE_0H07074G
LAFE_0H07074g1_1.
     
 0.713
LAFE_0G15412G
LAFE_0G15412g1_1; Belongs to the small GTPase superfamily. Arf family.
    
 0.696
LAFE_0E13190G
LAFE_0E13190g1_1; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
LAFE_0B03510G
LAFE_0B03510g1_1; Belongs to the small GTPase superfamily. Arf family.
    
 0.500
LAFE_0B03488G
LAFE_0B03488g1_1; Belongs to the small GTPase superfamily. Arf family.
    
 0.500
LAFE_0D10044G
LAFE_0D10044g1_1.
     
 0.476
LAFE_0F03884G
LAFE_0F03884g1_1.
      
 0.412
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.