STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0B07250GLAFE_0B07250g1_1. (312 aa)    
Predicted Functional Partners:
LAFE_0A00826G
LAFE_0A00826g1_1.
   
 0.999
LAFE_0A03114G
LAFE_0A03114g1_1.
   
 0.999
LAFE_0A05094G
LAFE_0A05094g1_1; Belongs to the AAA ATPase family.
   
 0.999
LAFE_0A04632G
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
LAFE_0B04280G
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
LAFE_0B03048G
LAFE_0B03048g1_1.
   
 0.999
LAFE_0B12398G
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
LAFE_0C09604G
LAFE_0C09604g1_1; Belongs to the AAA ATPase family.
   
 0.999
LAFE_0D01706G
LAFE_0D01706g1_1; Belongs to the AAA ATPase family.
   
 0.999
LAFE_0D03158G
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.