STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0C01090GLAFE_0C01090g1_1; Belongs to the universal ribosomal protein uS12 family. (163 aa)    
Predicted Functional Partners:
LAFE_0B06876G
LAFE_0B06876g1_1.
  
 0.999
LAFE_0C08570G
LAFE_0C08570g1_1; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
LAFE_0C05490G
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.998
LAFE_0D07734G
LAFE_0D07734g1_1; Belongs to the universal ribosomal protein uS15 family.
  
 0.998
LAFE_0F08460G
LAFE_0F08460g1_1; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
LAFE_0G16952G
LAFE_0G16952g1_1; Belongs to the universal ribosomal protein uS7 family.
 
 0.998
LAFE_0G18052G
LAFE_0G18052g1_1.
  
 0.998
LAFE_0G17788G
LAFE_0G17788g1_1.
  
 0.998
LAFE_0H13894G
LAFE_0H13894g1_1.
  
 0.998
LAFE_0H13718G
LAFE_0H13718g1_1; Belongs to the universal ribosomal protein uS2 family.
  
 0.998
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.