Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO1 | LAFE_0B11848G | A0A1G4MK84 | A0A1G4M925 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | LAFE_0B11848g1_1. | 0.404 |
LAFE_0B11848G | ARO1 | A0A1G4M925 | A0A1G4MK84 | LAFE_0B11848g1_1. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.404 |
LAFE_0B11848G | LAFE_0F07250G | A0A1G4M925 | A0A1G4MFE4 | LAFE_0B11848g1_1. | LAFE_0F07250g1_1. | 0.409 |
LAFE_0B11848G | LAFE_0H11254G | A0A1G4M925 | A0A1G4MKB5 | LAFE_0B11848g1_1. | LAFE_0H11254g1_1. | 0.411 |
LAFE_0F07250G | LAFE_0B11848G | A0A1G4MFE4 | A0A1G4M925 | LAFE_0F07250g1_1. | LAFE_0B11848g1_1. | 0.409 |
LAFE_0H11254G | LAFE_0B11848G | A0A1G4MKB5 | A0A1G4M925 | LAFE_0H11254g1_1. | LAFE_0B11848g1_1. | 0.411 |