STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0C01508GLAFE_0C01508g1_1. (303 aa)    
Predicted Functional Partners:
LAFE_0E03620G
LAFE_0E03620g1_1.
    
 0.775
LAFE_0H15654G
LAFE_0H15654g1_1.
    
 0.766
LAFE_0F12112G
LAFE_0F12112g1_1.
  
 
 
0.753
LAFE_0H15676G
LAFE_0H15676g1_1; Belongs to the PdxS/SNZ family.
   
 0.726
LAFE_0H12442G
LAFE_0H12442g1_1.
     
 0.719
LAFE_0F05182G
LAFE_0F05182g1_1.
    
 0.694
LAFE_0D07272G
LAFE_0D07272g1_1; Belongs to the SKP1 family.
    
 
 0.657
LAFE_0G16270G
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.529
LAFE_0C02762G
LAFE_0C02762g1_1.
     
 0.482
LAFE_0F11188G
LAFE_0F11188g1_1.
   
 
 0.451
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.