STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0D04742GLAFE_0D04742g1_1. (202 aa)    
Predicted Functional Partners:
LAFE_0F14686G
LAFE_0F14686g1_1.
   
 0.999
LAFE_0D02806G
LAFE_0D02806g1_1.
  
0.952
LAFE_0F02982G
LAFE_0F02982g1_1.
  
0.952
LAFE_0B12024G
LAFE_0B12024g1_1.
   
0.904
LAFE_0E13608G
LAFE_0E13608g1_1.
   
 0.868
LAFE_0A03136G
LAFE_0A03136g1_1.
   
0.862
LAFE_0E14554G
LAFE_0E14554g1_1.
   
 0.824
LAFE_0C04126G
LAFE_0C04126g1_1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.779
LAFE_0B02740G
LAFE_0B02740g1_1; Belongs to the WD repeat SEC13 family.
    
 0.764
LAFE_0F17986G
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  0.742
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.