STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0D04918GLAFE_0D04918g1_1. (1012 aa)    
Predicted Functional Partners:
LAFE_0D07360G
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.894
LAFE_0F12794G
LAFE_0F12794g1_1.
    
 0.886
LAFE_0H09472G
LAFE_0H09472g1_1.
   
 0.883
LAFE_0E09780G
Mannosyltransferase.
    
 0.878
LAFE_0G15456G
LAFE_0G15456g1_1.
  
 0.864
LAFE_0E13850G
LAFE_0E13850g1_1.
    
 0.858
LAFE_0C12684G
LAFE_0C12684g1_1.
  
 0.853
LAFE_0H17370G
LAFE_0H17370g1_1.
   
 0.852
LAFE_0F14576G
LAFE_0F14576g1_1.
   
 0.833
LAFE_0F08416G
LAFE_0F08416g1_1.
     
 0.731
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
Server load: low (26%) [HD]