STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0D09846GLAFE_0D09846g1_1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (805 aa)    
Predicted Functional Partners:
LAFE_0G18426G
LAFE_0G18426g1_1.
   
 0.997
LAFE_0E08548G
LAFE_0E08548g1_1.
   
 0.979
LAFE_0G03796G
LAFE_0G03796g1_1.
    
 0.951
LAFE_0C09098G
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.909
LAFE_0F03224G
LAFE_0F03224g1_1.
    
 
 0.903
LAFE_0F07558G
LAFE_0F07558g1_1.
    
 0.877
LAFE_0H07294G
Small nuclear ribonucleoprotein Sm D3.
    
 0.724
LAFE_0B11760G
LAFE_0B11760g1_1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 0.705
LAFE_0G12618G
LAFE_0G12618g1_1; Belongs to the protein kinase superfamily.
   
 0.700
LAFE_0G13388G
LAFE_0G13388g1_1; Belongs to the protein kinase superfamily.
   
 0.700
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.