STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0E02234GLAFE_0E02234g1_1. (227 aa)    
Predicted Functional Partners:
LAFE_0G01750G
LAFE_0G01750g1_1.
   
 0.998
LAFE_0B11562G
LAFE_0B11562g1_1.
   
 0.978
LAFE_0C10110G
LAFE_0C10110g1_1.
   
 0.977
LAFE_0H13916G
LAFE_0H13916g1_1.
   
 0.975
LAFE_0H15082G
LAFE_0H15082g1_1.
   
 0.946
LAFE_0G02388G
LAFE_0G02388g1_1.
    
 
 0.920
LAFE_0H17194G
LAFE_0H17194g1_1; Belongs to the AAA ATPase family.
   
 0.905
LAFE_0D01904G
LAFE_0D01904g1_1.
   
 0.904
LAFE_0F07976G
LAFE_0F07976g1_1.
    
 0.884
LAFE_0H11848G
LAFE_0H11848g1_1.
    
 0.715
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.