STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0E11122GIsocitrate dehydrogenase [NAD] subunit, mitochondrial. (361 aa)    
Predicted Functional Partners:
LAFE_0F04236G
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
LAFE_0E10924G
LAFE_0E10924g1_1.
  
0.966
LAFE_0D01486G
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.931
LAFE_0E12068G
LAFE_0E12068g1_1.
  
 0.890
LAFE_0E07932G
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.884
LAFE_0F09604G
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.884
LAFE_0A05050G
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.870
LAFE_0B02212G
LAFE_0B02212g1_1.
  
 
 0.855
LAFE_0G03488G
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.848
LAFE_0B06304G
Dihydrolipoyl dehydrogenase.
  
 0.840
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.