STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0F01068GLAFE_0F01068g1_1. (729 aa)    
Predicted Functional Partners:
LAFE_0F03730G
LAFE_0F03730g1_1.
   
 
 0.693
LAFE_0G05644G
LAFE_0G05644g1_1.
    
 0.657
LAFE_0G08372G
LAFE_0G08372g1_1.
    
 0.656
LAFE_0E12596G
LAFE_0E12596g1_1.
   
 0.639
LAFE_0A02850G
LAFE_0A02850g1_1; Belongs to the DOCK family.
   
 0.606
LAFE_0F07030G
LAFE_0F07030g1_1.
   
 
 0.574
LAFE_0C11518G
LAFE_0C11518g1_1.
   
 
 0.549
LAFE_0G17766G
LAFE_0G17766g1_1.
    
 0.461
LAFE_0G17744G
LAFE_0G17744g1_1.
    
 0.461
LAFE_0H05666G
LAFE_0H05666g1_1.
    
 0.443
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.