STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0E14818GLAFE_0E14818g1_1. (300 aa)    
Predicted Functional Partners:
LAFE_0C06678G
LAFE_0C06678g1_1.
   
 
 0.980
LAFE_0B04258G
LAFE_0B04258g1_1.
   
   0.972
LAFE_0C05842G
LAFE_0C05842g1_1.
   
   0.970
LAFE_0B11980G
LAFE_0B11980g1_1.
   
   0.969
LAFE_0B08482G
LAFE_0B08482g1_1.
   
   0.961
LAFE_0D01772G
LAFE_0D01772g1_1.
   
 
 0.961
LAFE_0E03928G
LAFE_0E03928g1_1; Belongs to the DEAD box helicase family.
   
 
 0.961
LAFE_0F11958G
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.961
LAFE_0H01464G
LAFE_0H01464g1_1.
   
 
 0.961
LAFE_0B05820G
LAFE_0B05820g1_1; Belongs to the protein kinase superfamily.
    
 
 0.956
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.