STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0F02454GLAFE_0F02454g1_1. (280 aa)    
Predicted Functional Partners:
LAFE_0E15214G
LAFE_0E15214g1_1.
   
 0.892
LAFE_0C02388G
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 
 0.882
LAFE_0G08262G
LAFE_0G08262g1_1.
  
 0.853
LAFE_0B04302G
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.825
LAFE_0B10440G
LAFE_0B10440g1_1.
   
 0.807
LAFE_0C02762G
LAFE_0C02762g1_1.
   
 0.801
LAFE_0A00848G
LAFE_0A00848g1_1.
     
 0.774
LAFE_0E06414G
LAFE_0E06414g1_1.
  
 0.753
LAFE_0E06436G
LAFE_0E06436g1_1.
  
 0.753
LAFE_0E08526G
LAFE_0E08526g1_1.
   
 
 0.750
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.