STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0F06524GLAFE_0F06524g1_1. (550 aa)    
Predicted Functional Partners:
LAFE_0H06480G
LAFE_0H06480g1_1.
   
  0.589
LAFE_0D05182G
LAFE_0D05182g1_1.
   
  0.550
LAFE_0H08284G
LAFE_0H08284g1_1.
   
  0.550
LAFE_0C06216G
LAFE_0C06216g1_1.
    
 0.488
LAFE_0D09010G
LAFE_0D09010g1_1; Belongs to the calmodulin family.
    
 0.488
LAFE_0H17524G
LAFE_0H17524g1_1.
    
 0.488
LAFE_0E00936G
Phosphoinositide phospholipase C.
   
 
 0.480
LAFE_0E04808G
LAFE_0E04808g1_1.
    
 
 0.439
LAFE_0A01772G
LAFE_0A01772g1_1.
    
 
 0.434
LAFE_0E03642G
LAFE_0E03642g1_1.
      
 0.430
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.