STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0F07756GLAFE_0F07756g1_1. (986 aa)    
Predicted Functional Partners:
LAFE_0E03466G
LAFE_0E03466g1_1.
    
 0.998
LAFE_0D07096G
LAFE_0D07096g1_1.
   
 0.994
LAFE_0D01684G
LAFE_0D01684g1_1.
    
 0.986
LAFE_0D07514G
LAFE_0D07514g1_1.
    
 0.957
LAFE_0H07008G
LAFE_0H07008g1_1.
    
 0.913
LAFE_0F03906G
LAFE_0F03906g1_1.
   
 
 0.860
LAFE_0C10374G
LAFE_0C10374g1_1.
    
 0.857
LAFE_0H05842G
LAFE_0H05842g1_1.
   
 0.850
LAFE_0C05644G
Nuclear cap-binding protein subunit 2.
   
 0.848
LAFE_0C08680G
LAFE_0C08680g1_1.
   
 0.824
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.