STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0F13586GLAFE_0F13586g1_1; Belongs to the cytochrome P450 family. (536 aa)    
Predicted Functional Partners:
LAFE_0E06788G
LAFE_0E06788g1_1; Belongs to the sterol desaturase family.
   
 0.999
LAFE_0A03972G
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
 
 0.998
LAFE_0D02674G
LAFE_0D02674g1_1.
 
 
 0.996
LAFE_0E02608G
LAFE_0E02608g1_1.
   
 0.996
LAFE_0G06854G
LAFE_0G06854g1_1.
 
 
 0.992
LAFE_0F14950G
Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol.
   
 0.990
LAFE_0H08790G
LAFE_0H08790g1_1.
   
 0.990
LAFE_0D03114G
LAFE_0D03114g1_1.
   
 0.988
LAFE_0B05864G
LAFE_0B05864g1_1.
   
 
 0.986
LAFE_0C02498G
LAFE_0C02498g1_1.
   
 
 0.983
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.