STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0F13806GLAFE_0F13806g1_1. (765 aa)    
Predicted Functional Partners:
LAFE_0H05578G
LAFE_0H05578g1_1.
   
 0.824
LAFE_0F07976G
LAFE_0F07976g1_1.
    
 0.821
LAFE_0H03400G
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.794
LAFE_0F14400G
LAFE_0F14400g1_1.
    
 
 0.740
LAFE_0A04896G
LAFE_0A04896g1_1.
    
 0.720
LAFE_0E13630G
LAFE_0E13630g1_1.
    
 
 0.697
LAFE_0B08504G
LAFE_0B08504g1_1.
    
 0.676
LAFE_0C10110G
LAFE_0C10110g1_1.
    
 0.673
LAFE_0C10528G
LAFE_0C10528g1_1.
   
 
 0.650
LAFE_0A03950G
LAFE_0A03950g1_1.
   
 0.572
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.