STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0F12860GPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (209 aa)    
Predicted Functional Partners:
LAFE_0G11980G
Peptidylprolyl isomerase.
 
 0.955
LAFE_0A04896G
LAFE_0A04896g1_1.
   
 0.935
LAFE_0G00936G
Peptidylprolyl isomerase.
 
 0.906
LAFE_0C09318G
LAFE_0C09318g1_1.
 
 
 0.833
LAFE_0D03576G
Tryptophan synthase.
   
 
 0.831
LAFE_0B11980G
LAFE_0B11980g1_1.
   
 
 0.796
LAFE_0G01002G
Protein disulfide-isomerase.
   
 0.769
LAFE_0G08372G
LAFE_0G08372g1_1.
   
 0.630
LAFE_0H05380G
LAFE_0H05380g1_1.
   
 
 0.617
LAFE_0C03400G
LAFE_0C03400g1_1.
  
 0.600
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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